Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENILDLWNQALAQIEKKLSKPSFETWMKSTKAHSLQGDTLTITAPNEFARDWLESRYLHLIADTIYELTGEELSIKFVIPQNQDVEDFMPKPQVKKAVKEDTSDFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVDFRNRYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEVMLYIANQIDSNIRELEG--ALIRVVAYSSLINKDINADLAAEALKDIIPSSKPKVITIKEIQRVVGQQFNIKLEDFKAKKRTKSVAFPRQIAMYLSREMTDSSLPKIGEEFGGRDHTTVIHAHEKISKLLADDEQLQQHVKEIKEQLK
2HCB Chain:D ((1-295))------------------------------------------------------------------------------------------------------------DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEA--KKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENT-KNVREIEGKIKLIKLKGFEGLERKE--------------RKERDKLMQIVEF---VANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHA--------------------------


General information:
TITO was launched using:
RESULT:

Template: 2HCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121612 for 2173 contacts (-56.0/contact) +
2D Compatibility (PS) -31153 + (NN) -12739 + (LL) 12656
1D Compatibility (HY) -26400 + (ID) 6100
Total energy: -185348.0 ( -85.30 by residue)
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_2HCB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HCB-query.scw
PDB file : Tito_Scwrl_2HCB.pdb: