Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------MYNVIGVRFKKAGKIYYFDPNGFH--------IEHDSCVIVETVRGV--EYGQVVIAN--KQVDEHDVVLPL-------------RKVIRVADDRD--LLIVEENKQEALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFREL-----VKDLASIFKTRIELRQIG--VRDEAKMLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNILERVLQVELINREKVIEY--TWEELLEEGVVSAQTTD---------------------- |
| 3C1Y Chain:A ((27-375)) | VPQELIEKIKLISPGTELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELSKMDGAIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVLELENRVTLADVVRTLAKGFELLRIVEEIRPYIVELGEEGRLARMQLRELTEDVDDLLVLLIMDYSSEEVEEETAQNILQDFI--TRREPSPISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLKKVEGIGEKRARAISESISSLKHRKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50741 for 1954 contacts (-26.0/contact) +
2D Compatibility (PS) -28627 + (NN) -2658 + (LL) 112
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -91214.0 ( -46.68 by residue)
QMean score : 0.211
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