Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLD-AVLLSKFAYVPIQKGKIVDLCTGNG-IVPLLLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDD----LKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK |
2H00 Chain:A ((5-254)) | VSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFGITE---------IMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGV--PKVTYTEFCQGRTMRWALAWSFYD-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2H00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -64103 for 1570 contacts (-40.8/contact) +
2D Compatibility (PS) -21613 + (NN) -9104 + (LL) 2328
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -99992.0 ( -63.69 by residue)
QMean score : 0.359
|
|
|