Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQFQIGDMVARKSYQMDVLFRIIGIEQTSKGNSIAILHGDEVRLIADSDFSDLVAVKKDEQMMRKKKDESRMNESLELLRQDYKLLREKQEYYATSQYQHQEHYFHMPGKVLHLDGDEAYLKKCLNVYKKIGVPVYGIHCHEKKMSASIEVLLDKYRPDILVITGHDAYSKQKGGIDDLNAYR--------HSKHFVETVQTARKKIPHLDQLVIFAGACQS--HFESLIRAGANFASSPSRVNIHALDPVYIVAKISFTPFMERINVWEVLRNTLTREKGLGGIETRGVLRIGMPYKSN |
1P0K Chain:A ((177-285)) | ----------------------------------------------------------------------------------------------------------------------------------VSVPVIVKEVGFGMSK-ASAGKLYEAGAAAVDIGG------------------RQISFFNSWGISTAASLAEIRSEFP--ASTMIASGGLQDALDVAKAIALGASCTGMAGHFLK------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33562 for 600 contacts (-55.9/contact) +
2D Compatibility (PS) -8923 + (NN) -1474 + (LL) 15192
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -30667.0 ( -51.11 by residue)
QMean score : 0.543
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