Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MDDSI---GVKRHWIW-QGAFVLILAGVITKILSAVYRVPFQNIV---------------GDVGFYIY-----QQVYPFLGIAVMLSTSGFP------------------VII--------SKLMNDYSEKNHHTILKISAL----------FLSLIGILLFLC----LYLGAVPIALFMGDSHL--------------AVLIQVAAYAFLLFPFVALLRGGFQGRHEMLPSAL----------SQMTEQFLRVAVLL----------GLSFWLVKKGASLYTAGAAAASGSLAGSLVALIILGFFWFKTKRDNQTDRQNENVITTKELTKKLLLYSVTICVSSLLLLFIQLVD---ALNLYALLSGG--EASEEAKCLKGIY-------DRGQPLLQLGSVF-------AVSIATSLVPYISMAVKN-KELKIMK-EKITSSLKLCLV-LGTGASAGLICILKPVNIMLFQNGEGTGA-LQVFSCSILFASLAVTAAAVLQGA-GYTVFP------------------AIAVGAGVAVKWVLNTLLVPRYGIEGASLATAASFAAVAGL-NLYQLRQKEWLDKLR--GVLIPIIG-SALLMSAVLLAYTRLWTFLFPATGRGAAV-IESL----SAVAIGGAVFIYCMMR--LGIFTDEELNSVPFGSKLSKFMRRREQNGG |
| 4S3Q Chain:A ((2-691)) | ESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNK--QKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMR-WGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLP-TLRGYWECGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKDLDRRRRSAH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -326819 for 3775 contacts (-86.6/contact) +
2D Compatibility (PS) -55089 + (NN) -6073 + (LL) 252
1D Compatibility (HY) -18400 + (ID) 5050
Total energy: -411179.0 ( -108.92 by residue)
QMean score : 0.154
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