Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNGHLNQILLITDGCSNHGEDPLAMAAFAKEQGITVNVIGIMEENQIDPEAMKEVEGIALAGGGVHQVVYASQLSQTVQMVTKKAMTQTLQGVVNQELKQILGKNVEMEELSPEKRGEVMEVVDELGETVHLQVLVLVDTSASMAP-KLPTVKEALIDLSVSLNSRIGNNEFAMCIFPGKKQEVELVLNWTP-KLQSLSTLFAKLS-TGGITPTGPAIREATLQFEKI-------RSRRGMLADDERRFDEFGM |
4OKR Chain:A ((6-157)) | ---------------------------------------------------------------------------------------------------------------------------------TNQLDICFLIDSSGSIGIQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTDVHLQWDLQSPNAVDKQLAAHAVLEMPYKKGSTNTADGLKACKQILFTGSRPGREHVPKLVIGMTDGESDS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37811 for 845 contacts (-44.7/contact) +
2D Compatibility (PS) -11311 + (NN) 2063 + (LL) 10032
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -39827.0 ( -47.13 by residue)
QMean score : 0.431
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