Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMNDALTSLACSLKPGTTIKGKWNGNTYTLRKQLGKGANGIVYLAE---TSDGHVALKV-------SDDSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDAYIPSANTKVSFYAMEYIKGPLLLKYVSDKG-----AEWIPVLMIQLLSSLSVLHQQ-GWIFGDLKPDNLIVTGPPAR---IRCIDVGGTTKEGRAIKEYTEFYDRGYWGYGTRK------------AEPSYDLFAVAMIMINSVH-------KKEFKKTNQPKEQLRSLIEG-------------------------NPLLQKYKKALFSALNGDYQSADEMKKDMLDA----------GQKAAQRKQPIKASPQPATRQRQQKPRQGKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI |
1BLX Chain:A ((5-309)) | -----------GLCR------A--DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV-VRLFDVCTVSRT-DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTS----SGQIKLADFGLA----R--I--YSFQMALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGS-------SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVT------------DIDELGKDLLLKCLTFNPAKRI-----SAYSALSHPYFQ------DLERCKEN---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BLX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58791 for 1559 contacts (-37.7/contact) +
2D Compatibility (PS) -25497 + (NN) -16819 + (LL) 7240
1D Compatibility (HY) -14800 + (ID) 2900
Total energy: -111567.0 ( -71.56 by residue)
QMean score : 0.353
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