Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSPDFLMISPGPCSPDE-AGISLEAIKHFA-GKIPIFGVCLGHQSIAQVFGGDVVRAERLMHGKTSDIEH-DGKTIFEGLKNPLVATRYHSLIVKPETLPSCFTVTAQTKEGEIMAIRHNDLPIEGVQFHPESIMTSFGKEMLRNFIETYRKEVIA
2A9V Chain:A ((15-202))
KIYVVDNGGQWTHREWRVLRELGVDTKIVPNDID-SSE--LDGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFGKT-KVSVMHSENIFGGLPSEITVWENHNDEII--NLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGICASY---
General information:
TITO was launched using:
RESULT:
Template:
2A9V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102784 for 1585 contacts (-64.8/contact) +
2D Compatibility (PS) -19768 + (NN) -9453 + (LL) 836
1D Compatibility (HY) -6400 + (ID) 2900
Total energy: -140469.0 ( -88.62 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2A9V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9V-query.scw
PDB file :
Tito_Scwrl_2A9V.pdb
: