Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKVYVEGMEFYGYHGVFTEENKLGQRFKVDLTAELDLSKAGQTDDLEQTINYAELYHVCKDIVEGEPVKLVETLAERIAGTVLGKFQPVQQCTVKVIKPDPPIPGHYKSVAIEITRKKS
5FAR Chain:C ((5-122))
-DKIYIHDMEFYGYHGVFPEENKLGQRFKVDLTVELDLKRAGESDDLEHSVNYGELFELCRKVVEDRTYKLVESIAENIATDILKQYESISRCTIKVIKPDPPIPGHYRAVAVEITRER-
General information:
TITO was launched using:
RESULT:
Template:
5FAR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 31132 for 802 contacts (38.8/contact) +
2D Compatibility (PS) -12556 + (NN) -6869 + (LL) 272
1D Compatibility (HY) 8000 + (ID) 350
Total energy: 19629.0 ( 24.48 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_5FAR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5FAR-query.scw
PDB file :
Tito_Scwrl_5FAR.pdb
: