Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
4M5N Chain:B ((6-139))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4M5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98204 for 1018 contacts (-96.5/contact) +
2D Compatibility (PS) -13747 + (NN) -3191 + (LL) 2088
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -125854.0 ( -123.63 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_4M5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M5N-query.scw
PDB file :
Tito_Scwrl_4M5N.pdb
: