Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQ-GFTKPNDLHKKSSRIVSAKSQAEILFFLQNQSFFTEEEEAVLKRGRNAKSGTTPKNTDVQTYRYSTAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT
1O0W Chain:A ((46-156))
----------DVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGK--------FLFLGKGEEKTGGRDRDS----ILADAFEALLAAIYLDQGYEKIKELFEQEFEFY-----------
General information:
TITO was launched using:
RESULT:
Template:
1O0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26632 for 738 contacts (-36.1/contact) +
2D Compatibility (PS) -11787 + (NN) -3515 + (LL) 2352
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -48032.0 ( -65.08 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1O0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0W-query.scw
PDB file :
Tito_Scwrl_1O0W.pdb
: