Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4MKF Chain:B ((1-217))
MNLVLMGLPGAGKGTQGEKIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVRKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQMQPLLDFYSEKGYLANVNGEQDIEDVYADVKDLLGGLKK
General information:
TITO was launched using:
RESULT:
Template:
4MKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83838 for 1684 contacts (-49.8/contact) +
2D Compatibility (PS) -24040 + (NN) -17643 + (LL) 0
1D Compatibility (HY) -30000 + (ID) 10600
Total energy: -166121.0 ( -98.65 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_4MKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MKF-query.scw
PDB file :
Tito_Scwrl_4MKF.pdb
: