Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEK--CRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPK-----EKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDH--NFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLIIKGKIDGDVTVVNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE- |
| 1Q87 Chain:A ((147-345)) | SMCI------------GNSTPNEQETFRAKVDEIWFRLTQKTDGTVMRDFLIEKAAEYFKQPEQPKQNAIEVISAIMAPQEEQTKSKADLYKFLAMFGPYETIMLKIASLLLISNNKGHWLTFDPQDSISGWFDQNEPNCLILKTPTGIRKIWNKPLI--EATGQYLMDENGEKY-------------------DSWDKYFEMKPIAYPTFAPMHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12961 for 1193 contacts (-10.9/contact) +
2D Compatibility (PS) -17694 + (NN) -650 + (LL) 3284
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -32471.0 ( -27.22 by residue)
QMean score : 0.270
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