Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERDT-GMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKN--NEIAAAACYLPLSESPFISKELGTRHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG |
| 3C1Y Chain:A ((27-183)) | --------------------------------------------------------------------------------VPQELIEKIKLISPG------------------TELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHLVPDPT-IPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83719 for 1137 contacts (-73.6/contact) +
2D Compatibility (PS) -17112 + (NN) -8819 + (LL) 10708
1D Compatibility (HY) -9200 + (ID) 1750
Total energy: -109892.0 ( -96.65 by residue)
QMean score : 0.548
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