Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKSKGSIESEISKSITQWEKDYLGRGSVSVKTDILRDMIIVNLKGILTPAEYVVCGSKEGMLSIKQTRSELVESGIEGLKDIILKITGEKVKSFHTDLSSRTGERVMVFKLCNDLEKNLEKIL
2MN4 Chain:A ((1-94))
MTPEQREFLPEILAEIIA------NLDPTKILEELLRR-------GLLTPAELQEVLDLKT-----------PEEQAKKLIDFILKLSPADVQARINVLRAH-GYQALADKLNKYLTLE-----
General information:
TITO was launched using:
RESULT:
Template:
2MN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15356 for 574 contacts (-26.8/contact) +
2D Compatibility (PS) -9647 + (NN) 125 + (LL) 3408
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -27070.0 ( -47.16 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_2MN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MN4-query.scw
PDB file :
Tito_Scwrl_2MN4.pdb
: