Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 3AFG Chain:A ((434-503)) | ------------------------------------------------------------GSQSHQFTISGAGFVTATLYWDNSGSDLDLYLYDPNGNQVDYSYTA-----YYGFEKVGY-YNPTAGTWTIKVVSY----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12768 for 427 contacts (-29.9/contact) +
2D Compatibility (PS) -7506 + (NN) -4112 + (LL) 12304
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -13882.0 ( -32.51 by residue)
QMean score : 0.339
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