Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDVTLGYLRESLSNHLENEVCQRICKKMLAKRYANEEEFVKDLDDNEMSFLNHVLEKEIKYAQ-NEQDQKRAKELNEVYELLL
3LJW Chain:A ((58-110))
---------------------KTIAQRIQNGSYKSIHAMAKDID--------LLAKNAKTYNEPGSQVFKDANSIKKIFYMK-
General information:
TITO was launched using:
RESULT:
Template:
3LJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3872 for 266 contacts (14.6/contact) +
2D Compatibility (PS) -5650 + (NN) -3426 + (LL) 2020
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -5634.0 ( -21.18 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_3LJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LJW-query.scw
PDB file :
Tito_Scwrl_3LJW.pdb
: