Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAIERS--------------------GYTFQPEFSVVRQNGAIHVYHQGEFVEEIEF-EFNGEYPDHDLIEELVNHYCFEHEI
2M6M Chain:A ((1-83))
VANEETDTATFNDDAPSGATCRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCDICHYP-IQFKT
General information:
TITO was launched using:
RESULT:
Template:
2M6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14300 for 311 contacts (-46.0/contact) +
2D Compatibility (PS) -6136 + (NN) 1892 + (LL) 56
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -20938.0 ( -67.32 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_2M6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M6M-query.scw
PDB file :
Tito_Scwrl_2M6M.pdb
: