Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEQAEIIKTEVEKELLNME-ENQDALLYYQLLEFRHEIMLSYMK-SKEIEDLNNAYETIKEIEKQGQLTGMLEYYFYFFKGMYEFRRKELISAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTYFSMNYANRALKIFREYEEY-AVQTVRCQFIVAGNLIDSLEYERALEQFLKSLEISKESNIEHLIAMSHMNIGICYDELKEYKKASQHLILALEIFEKSKHSFLTKTLFTLTYVEAKQQNYNVALIYFRKGRFIADKSDDKEYSAKFKILEGLFFSDGETQLIKNAFSYLASRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIIDENQPDSIGSSDFK
3Q15 Chain:A ((8-371))-----------PSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQ-MEEDQDLLIYYSLMCFRHQLMLDYLEPTVTE-L-LETI---ETP-QK-KLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILK------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1516 -163370 -107.76 -462.80
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -107.76
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_3Q15.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q15-query.scw
PDB file : Tito_Scwrl_3Q15.pdb: