Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVP-KGAMAFWEKRLEKFNVPYTK-IE-----RFGEQYVEFDDPHGLHLEIVEREEGEA-NTWTFG---EVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKE---------GDFVRYRSAGDIGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDR--NYFNAIYFREHGEILFEIATDPPGFAHDETQETMGEKLMLPVQYEPHRTQIEQGLLPFEVRELD
2WL9 Chain:A ((1-287))-MAKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGED------DRIYLRMD--RWHHRIVLHAD--------GSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYR-LLGLEGAVEYKFALPNGAVGTPVFMHCND-RHHSLAFGV------GPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGSRPAP--AQQEHYLRDIFGHDN---------------------


General information:
TITO was launched using:
RESULT:

Template: 2WL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1479 -133910 -90.54 -507.23
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -90.54
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_2WL9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WL9-query.scw
PDB file : Tito_Scwrl_2WL9.pdb: