Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEISKQTSDLLLSLEKKKGTLPKFSVLRSIPRNRIIYGAPGTGKSNYLEREVGKIFGDNPYVFTRVTFFPGYTYGQFIGAYKPVPIYKKLSGEEEIFSSNFRDKMENFEPMIDYQFVPGPFIDVLIKALKNRYTNFILIIEEINRANAASVFGDIFQLLDRNKNGESDYPVTFGPDIMNYLARNGIKDEMIKLPSNFFIWATMNNADQGVLPLDTAFKR--RWSFE-YLELEKYRKAVDSWKLSLRYKGHNKVIMWNDFRDIINKRLKGKVPEDKLLGPFFLKESELWNQNVFKNKLLYYLKEDVFKHNPTIDFLNASTFSELIEKYDGSDNIFTFDIDDSSFVSD
5FTJ Chain:A ((339-405))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AHVIVMAATNRPN----SIDPALRRFGRFDREVDIGIPDATGRLEILQIHT-----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 43 -3116 -72.47 -70.82
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -72.47
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.289

(partial model without unconserved sides chains):
PDB file : Tito_5FTJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FTJ-query.scw
PDB file : Tito_Scwrl_5FTJ.pdb: