Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDVTEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSE-LLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAEHADVIVVGNAVYEDFDRALKTVAAVKGE
4NAE Chain:A ((1-225))--EIRAWRHVFKLDPNKPIDDERLERLCESGTDAVIVG----VTIDNVLDLLARIRRFSVPCALEVTDV--LTPGFDVYLVPIVLNSRQAEWIIGRHHEAVKQYGDMMNWDEIAAEGYCILNPECKAAKLTRADTELDVDDIVAYARLAEHLYKLPIFYLEYSGVYGDPSVVEKVKQALDQTQLFYGGGITTPEQAEHMARYADTVVVGNAIYDAFEQALATVAAVK--


General information:
TITO was launched using:
RESULT:

Template: 4NAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1157 -179778 -155.38 -824.67
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -155.38
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.596

(partial model without unconserved sides chains):
PDB file : Tito_4NAE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NAE-query.scw
PDB file : Tito_Scwrl_4NAE.pdb: