Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQDLYQLIGEKLNDIIPGEWTKIYLYAEVLDDSTMVLFHFRTPENNQIIYSQDIPSHYNVSKDIFKTLLRELRELFEELRTEHRNNNDDVWTNLTLTLDRSGEFQLDYNYDDILASELDGYERIAIWEYKNLGILPEDEDDKEFVISYLGL
3LE4 Chain:A ((298-311))----------PPTEPLPDGWIMTF-------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4 -1152 -288.00 -82.29
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -288.00
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_3LE4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LE4-query.scw
PDB file : Tito_Scwrl_3LE4.pdb: