Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQQ
3EJD Chain:E ((20-95))MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH-


General information:
TITO was launched using:
RESULT:

Template: 3EJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 258 -39083 -151.48 -514.25
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain E : 0.88

3D Compatibility (PKB) : -151.48
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.731

(partial model without unconserved sides chains):
PDB file : Tito_3EJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EJD-query.scw
PDB file : Tito_Scwrl_3EJD.pdb: