Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MRSFATQQNGIFKSVCSLDCPDQCGLLIHKKDGKIVKVQGDPDHPVTAGNICNKVRNMTERIYDEKRLTTPLKRTGAKGQAIFEPISWKEAIDTITSRWKQLIDEEGAESILPYSFY-GNMGKLTAEGMDRRFFY-RMGSSQLE--RTICSKAGSEGYKYTMG-ISAGIDPEETVHTKLFIFWGINAVSTNMHQITIAQKARK--KGAKIVVIDVHKNQTGRLADWFIPIKPGTDSALALGIMHILFKENLHDEAFLSEYTV---------GYEELREHVKQYDPEKVSTITGVSTEDIYRLAKMYGETSPSFIRIGNGPQHHDNGGMIVRTIACLPAITGQWLHTGGGAIKHNSGIL-EYN-TNALQ----RPDLLK-G----RT-----PR----------SFNMNQLGRVLLETDPPIRSLFIYGTNPAVVAPEANKVRQGLLRED-LFTVVHDLFLTE-TAAYADIVLPATSAFENTDFYTSYWHHYIQLQQPVIERYGESKSNTEVFRLLAEAMGFTD-QELKDSDEVLIRQALDHPD--NPHLAEIDYDSLTKH-SFMKAKREKP-----L---F----------PG---ELPTPSGKIELYSEKMKQDGFPALPTYT-PLVTDNEHPFMYVPGPNHNFLNST--FSNNEKHIKLEKT-PKLFINTKDAEKHGIVDGAPVRIWNSRGECELTAAVGEQVLPGVVVSQGLWADEQGKKQLVNALTPDRLSDMGGGATFFSGRVQIEKV 2NAP Chain:A ((4-723)) ------RPEKWVKGVCR-YCGTGCGVLVGVKDGKAVAIQGNPNN-HNAGLLCLKGSLLIPVLNSKERVTQPLVRRH--KGGKLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCLTEESY---VANKIFKGGFGTNNVDGNPRLCMASAVGGYVTSFGKDEPMGTYADIDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRRTNTSRIADMHVAFRPGTDLAFMHSMAWVIINEELDNPRFWQRYVNFMDAEGKPSDFEGYKAFLENYRPEKVAEICRVPVEQIYGAARAFAESAATMSLWCMGINQRVQGVFANNLIHNLHLITGQICRPGATSFSLTGQPNACGGVRDGGALSHLLPAGRAIPNAKHRAEMEKLWGLPEGRIAPEPGYHTVALFEAL--GRGDVKCMIICETNPAHTLPNLNK-VHKAMSHPESFIVCIEAFPDAVTLEYADLVLPPAFWCERDGVYGCG-ERRYSLTEKAVDPPGQCRPTVNTLVEFARRAGVDPQLVNFRNAEDVWNEWRMVSKGTTYDFWGMTRERLRKESGLIWPCPSEDHPGTSLRYVRGQDPCVPADHPDRFFFYGKPDGRAVIWMRPAK--------GAAEEP--DAEYPLYLTSMRVIDHWHTATMTGKVPELQKAN-PIAFVEINEEDAARTGIKHGDSVIVETRRDAMELPARVSDVCRPGLIAVPFFDPK-----KLVNKLFLDATDPVSREPEYKICAARVRKA

General information: TITO was launched using: RESULT: Template: 2NAP.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4166 77477 18.60 119.75 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain A : 0.71 3D Compatibility (PKB) : 18.60 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.477

(partial model without unconserved sides chains): PDB file : Tito_2NAP.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2NAP-query.scw PDB file : Tito_Scwrl_2NAP.pdb: