Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIIINIDVMLAKRKMSVTELSERVGITMANLSILKNGKAKAIRLSTLEAICKALECQPGDILEYRSDEDTGFVKKKYEGSTEK
4RYK Chain:A ((9-75))-SYGELIREIRLSKGLTQKEVYTGI-ISRSYAIGFEKGKHE-ITLSLFEEILKRIMVPLDEFFFIYR-----------------


General information:
TITO was launched using:
RESULT:

Template: 4RYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 214 -51041 -238.51 -797.51
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -238.51
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_4RYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RYK-query.scw
PDB file : Tito_Scwrl_4RYK.pdb: