Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYASKLKKGDEIRIVSPATSMSILSN--EAKIQAKTAL-ERLGYRVTIAEHANECNEFDSSSIESRVHDLHAAFFDPGVKAILTTLGGFNSNQLLRYLDYEKIKRHPKILCGYSDITALCNAIYQKTGLVTYSGPHFSTFAMKKG--LDYTEEYFLSCCASDDP-FEIHPSSEWSDD--RWFLDQ--ENRRFYPNNGPVVIQ-EGYAEGTLIGGNLCTLNLLQGTEYFPE---TEHTILLIEDDYMSD-IHMFDRDLQSLIHLPAFSHVKAILIGRFQKASNV--SIDLVKAMIETKKELSGIPIIANINAGHTSPIATFPIGGTCRIEAISGTSRIWIDKH
5F5X Chain:A ((6-342))IKPKRLQAGDIVATVSPSWGGAGDSEIRWRYEQGVKRLEEVFGLTVVPMPNSLKGSEFIYNNPQARAEDLMTAFQDTRVKAIIANIGGQDSIRLLPYIDFNAIRENPKIFMGYADVTISHLFCH-KAGLSSFYGPAILTDFAENVEMDPYTVEMVNRTLFSNEMIGEIQPAPEWTSERLEWIEINKDTRRTMQQNNGYELLQGSTTVQGRLIGGCIEVLEFAKGTELWPEKKHWEDSILFFETSEDHPEPSYIKYWLRNYAAQGILQKAKGIIFGKPKDEMYYEEYKHEILQVMKEH-NLEDLPILYNLNFGHTEPKFILPYGSMAEIDCENGSFSILE---


General information:
TITO was launched using:
RESULT:

Template: 5F5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1829 -15590 -8.52 -48.72
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -8.52
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_5F5X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F5X-query.scw
PDB file : Tito_Scwrl_5F5X.pdb: