Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------MNIFVDQDNYKEVSLKLTKKLLTSEHYQFLLCFKGEKLDITISVTPQSLVKLRDDINELIFMFSD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4H2Q Chain:A ((10-379))KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKSVSKETFNG----LPWRIMTRSHLHDALVNRARALGVDISV--NSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ


General information:
TITO was launched using:
RESULT:

Template: 4H2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 141 2258 16.01 38.26
target 2D structure prediction score : 0.20
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 16.01
2D Compatibility (Sec. Struct. Predict.) : 0.20
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.161

(partial model without unconserved sides chains):
PDB file : Tito_4H2Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H2Q-query.scw
PDB file : Tito_Scwrl_4H2Q.pdb: