Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGSEPDAITAGDIIRVLEGPISPVEVLEDEEP-------AKRELWIRIRDAVKEVLDSTTLEDLASYTDGEQ--EAYMFYI
4CIC Chain:B ((5-152))LKVSTKGHYGVQAMFDLAQHFGEGPVSLKSIAERQGLSEPYLEQLIAVLRKAGLVKSVRGAQGGYILAREPRDIKVGDIIRVLEG-------------SLKFDFSVTKSVWEKVKKSIEEVLDSITLADMLKDAEEAQMAQGYMYY-


General information:
TITO was launched using:
RESULT:

Template: 4CIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 412 -46880 -113.79 -378.06
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -113.79
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_4CIC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CIC-query.scw
PDB file : Tito_Scwrl_4CIC.pdb: