Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKVYYNGDIKENVLAGKTVAVIGYGSQGHAHALNLKESGVDVIVGV-RQGKSFTQAQEDGHKVFSVKEAAAQAEIIMVLLPDEQQQKVYEAEIKDELTAGKSLVFAHGFNVHFHQIVPPADVDVFLVAPKGPGHLVRRTYEQGAGVPALFAIYQDVTGEARDKALAYAKGIGGARAGVLETTFKEETETDLFGEQAVLCGGLSALVKAGFETLTEAGYQPELAYFECLHELKLIVDLMYEEGLAGMRYSISDTAQWGDFVSGPRVVDAKVKESMKEVLKDIQNGTFAKEWIVENQVNRPR-FNAINASENEHQIEVVGRKLREMMPFVKQGKKKEAVVSVAQN
4XDZ Chain:B ((2-325))-AKIYKDEDISLEPIKNKTIAILGYGSQGRAWALNLRDSGLNVVVGLERQGDSWRRAIDDGFKPMYTKDAVAIADIIVFLVPDMVQKSLWLNSVKDFMKKGADLVFAHGFNIHFKIIEPPKDSDVYMIAPKSPGPIVRRSYEMGGGVPALVAVYQNVSGEALQKALAIAKGIGCARAGVIESTFKEETETDLFGEQVILVGGIMELIKASFETLVEEGYQPEVAYFETVNELKLIVDLIYEKGLTGMLRAVSDTAKYGGITVGKFIIDKSVRDKMKIVLERIRSGEFAREWIKEYERGMPTVFKELSELEG-STIETVGRKLREMM------------------


General information:
TITO was launched using:
RESULT:

Template: 4XDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1457 -71259 -48.91 -221.30
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -48.91
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_4XDZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XDZ-query.scw
PDB file : Tito_Scwrl_4XDZ.pdb: