Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MKSKFEASIDNLKEIEMNAYAYELIREIVLPDMLGQ------DYSSMMYWAGKHLARKFPLESWEEFPAFFEEAGWGTLTNVSAKKQELEFELEGPIISNRLKHQKEPCFQLEAGFIAEQIQLMNDQIAESYEQVKKRADKVVLTVKWDMKDPV
3DI2 Chain:A ((10-154))DGKQYESVLMVSIDQLLDSMKEIGSNCLNNE---FNFFKRHICDANKEGMFLFRAARKLRQFLKMNSTGDFDLHLLKVSEGTTILLNQKKLND----------------------------LCFLKRLLQEIKTCWNKILMGTKEH------------


General information:
TITO was launched using:
RESULT:

Template: 3DI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 357 13182 36.92 125.54
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 36.92
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.266

(partial model without unconserved sides chains):
PDB file : Tito_3DI2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DI2-query.scw
PDB file : Tito_Scwrl_3DI2.pdb: