Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMQEETF--YSVRMRASMNGSHEDGGKHISGGERLIPFHEMKHTVN--ALLEKG--------LSHSRGKPDFMQIQFEEVHES---------IKTIQPLPVHTNEVSCPEEGQKLARLLLEKEGVSRDVIEKAYEQIPEW---SDVRGAVLFDIHTGKRMDQTK----EKGVRVSRMDWPDANFEKWALHSHVPAHS-----------------------RIKEALALASKVSRHPAV--------VAELC--------WSDDPDYIT----GYVA-----------------GKKMGYQR--------ITAMK-EYGTEEGCRVFFIDGSNDVNTYIHDLEKQPILIEWEEDHDS---------------------------
2WZP Chain:R ((1-375))MLEANVYDNFNPNYYNISDFSMPNGKKE----KRGLPIPKARCQVINYELWETGYLYTSSATLTVSVEVGDIVQILFPEVVPIEEALGKKKKLNLDMVYLVTDVDESNKATLKNYFWAMIESLDVPNAITKTTNFAIIDYLIDPNKNNLMSYGYFFNSSIFAGKATINRKAETSSAHDVAKRIFSKVQFQPTTTIQHAPSETDPRNLLFINFASRNWNRKRITTRVDIKQSVTMDTETIVERSAYNFAVVFVKNKATDDYTDPPKMYIAKNNGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISPSTIVTRLIFNQNELLPLYVNDL----VDIWYEGKLYSGYIADRVKTEFNDRLIFVESGDKPNVI


General information:
TITO was launched using:
RESULT:

Template: 2WZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain R - contact count / total energy / energy per contact / energy per residue : 1121 22270 19.87 88.73
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain R : 0.67

3D Compatibility (PKB) : 19.87
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.040

(partial model without unconserved sides chains):
PDB file : Tito_2WZP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WZP-query.scw
PDB file : Tito_Scwrl_2WZP.pdb: