Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDVQHIDHSFTIGKKGRENEVPVLKDVSLSVAKGEIACIVGRSGSGKSTLLNLISGYISPTKGRIVINGTDVTGFNEKEWAQFRLDHFGFIFQSFQLIPGLTTYENVEMPLALKGIKPSERKQKVQDMLKRVGLENHAAHYPNELSGGQQQRVSIARALILNPSIILADEPTGSLDSETEHEVLELIQQLNRERGITFVIITHDDEVASIGHSKFQLHDGVLKGGITVEV
3TUZ Chain:D ((24-226))MIKLSNITKVFHQGTR----TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKAR-RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDV-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 989 -134169 -135.66 -660.93
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -135.66
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3TUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TUZ-query.scw
PDB file : Tito_Scwrl_3TUZ.pdb: