Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIVSILFMFGLVMGFSQFQPSTVFAADKVVHETIIVPKNTTYDGKGQRFVAGKELGDGSQSENQDPVFRVEDGATLKNVVLGAPAADGVHTYGNVNIQNVKWEDVGEDALTVKKEGKVTIDGGSAQKASDKIFQINKASTFTVKNFTADNGGKFIRQLGGSTFHVDVIIDKCTITNMKEAIFRTDSKTSTVRMTNTRYSNVGQKWIGVQHIYENNNTQF
4YZX Chain:B ((18-189))------------------------------VITDTIIVKSGQTYDGKGIKIIA-QGMGDGSQSENQKPIFKLEKGANLKNVIIGAPGCDGIHCYGDNVVENVVWEDVGEDALTVKSEGVVEVIGGSAKEAANAVFQLNAPCTFKVKNFTATNIGKLVRQNGNTTFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYHNLNVNNC------------------


General information:
TITO was launched using:
RESULT:

Template: 4YZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1112 -95950 -86.29 -557.85
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -86.29
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_4YZX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YZX-query.scw
PDB file : Tito_Scwrl_4YZX.pdb: