Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLKVMTVFGTRPEAIKMAPLVLELKKY-PEIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNT-AIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRR-ENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGD-SDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLV-LRDTTERPEGVEAGTLKLAGT-DEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFTGK
4FKZ Chain:A ((2-380))-KKLKVMTVFGTRPEAIKMAPLVLELKKYPE-IDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHPVL-DQVGEDKMILLTAHRREN-LGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHF-GDSDRVHLIEPLEVIDFHNFAAKSHFILTDSGGVQEEAPSLGKPVLVLR-DTTERPEGVEAGT-LKLAGTDEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIVEELLFHYGYRKEQPDSFTGK


General information:
TITO was launched using:
RESULT:

Template: 4FKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2209 53680 24.30 143.91
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.95

3D Compatibility (PKB) : 24.30
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_4FKZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FKZ-query.scw
PDB file : Tito_Scwrl_4FKZ.pdb: