Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEIRIYGEV--EQDLAKRQLLSLNDTKYILIEFPFD-----HVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVKTRNFHTQEALYVLEKEFGSELPYMLTENAELLLRNQTIFRQPPQPVKRRKLFGFF
1M65 Chain:A ((3-229))PVDLHMHTVAS-THAYSTLSD---YIAQAKQKGIKLFAITDHGPDMEDA---PHHWHFIN-MR-IWPRVVDGVGILRGIEANIKNVDGEIDCSGK----MFDSLDLIIAGFHEPVFAPHDKATNTQAMI-ATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSS-------NCREVAAAVRDAGGWVALGSDSHTAFTMG-EFEECLKILD-AVDFPPERILNVSPRRLLN---------------------


General information:
TITO was launched using:
RESULT:

Template: 1M65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1236 -19077 -15.43 -90.84
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -15.43
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_1M65.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M65-query.scw
PDB file : Tito_Scwrl_1M65.pdb: