Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVAIASDHGGVHIRNEIKELMDELQIEYIDMGCDCGSG-SVDYPDYAFPVAEKVVSGEVDRGILICGTGIGMSISANKVKGIRCALAHDTFSAKATREHNDTNILAMGERVIGPGLAREIAKIWLTTEFTG-GRHQTRIGKISDYEEKNL
3K8C Chain:B ((24-169))-RVAIGTDHPAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLACGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSGEERHVRRIEKIRAIE----


General information:
TITO was launched using:
RESULT:

Template: 3K8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 789 -45087 -57.14 -313.10
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -57.14
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_3K8C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K8C-query.scw
PDB file : Tito_Scwrl_3K8C.pdb: