Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS-PASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
2QQ0 Chain:B ((2-174))------SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPK------STMIVSH----VEAHVIERPEEMRKYIEEDTRGVFIDEVQFFNPSLFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEE------IDVGGQEKYIAVCR-----------


General information:
TITO was launched using:
RESULT:

Template: 2QQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 834 -111593 -133.80 -688.84
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -133.80
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_2QQ0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QQ0-query.scw
PDB file : Tito_Scwrl_2QQ0.pdb: