Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNASLRRISVTVMALIVLLLLNATMTQVFTADGLRADPRNQRVLLDEYSRQRGQITA-GGQLLAYSVATDGRFRFLRVYPNPEVYAPVTGFYSLRYSSTALERAEDPILNGSDRRLFGRRLADFFTGRDPRGGNVDTTINPRIQQAGWDAMQQGCYGPCKGAVVALEPSTGKILALVSSPSYDPNLLASHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETEQL-TAAPTIPLPGSTAQLENYGGAPCGDEPTVSLREAFVKSCNTAFVQLGIRTGADALRSMARAFGLDSPPRPTPLQVAESTVG--PI--PDSAALGMTSIGQK-------------DVALTPLANAEIAATIANGGITMRPYLVGSLKGPDLANISTTVGYQQRRAVSPQVAAKLTELMVGAEKVAQQ-KGAIPGVQIASKTGTAEHGTDPRHTPPHAWYIAFAPAQAPKVAVAVLVENGADRLSATGGALAAPIGRAVIEAALQGEP |
4MNR Chain:A ((23-452)) | -----------------------------------------------ARSERGTIATYDGVVLARSVK-EEDGTYEREYPAGDLASHVVGYSSPQFGNSGIEKAYNDTLKG------------------TAGNDVTLTLNSKIQQAAQDALAG-----RKGACVVMDPDTGAILAMASAPTYNAADFAAVIEQ-------ANANPDDSTLVDRAAGSLYAPGSTFKIVTLATALEDDVAGEDTVFSSPGTMEIGN--ATVSNFNKAN---YGSLTLAQATELSSNTVFGQLGVEMGADKLVAGAESFGFNKEIDF-PLYTPESLMPSAEDLQKSPWELAWAAAGEPVGDTTRPGRESPAGPQATVLEMAMVGTAIANDGVIMQPYLVDSVNNANGERSFSASPTKLMQAVSKTTAGRVRDVLLGVVQNGTGTAAAIPGIDVAGKTGTAEKEN-----GNDSWFVGMAPAEDPRVVVAIVIEDGEE-----G--VGTAKAQNVLKTALE--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148173 for 3716 contacts (-39.9/contact) +
2D Compatibility (PS) -42591 + (NN) -27035 + (LL) 6272
1D Compatibility (HY) -18000 + (ID) 6300
Total energy: -235827.0 ( -63.46 by residue)
QMean score : 0.467
|
|
|