Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRP
2XT9 Chain:B ((8-103))
---------------------------------------------------------PSGSALLVVKRGPNAGSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNREPVD-SAVLANGDEVQIGKFRLVFL-
General information:
TITO was launched using:
RESULT:
Template:
2XT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64015 for 715 contacts (-89.5/contact) +
2D Compatibility (PS) -10480 + (NN) -3569 + (LL) 5680
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -79684.0 ( -111.45 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_2XT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XT9-query.scw
PDB file :
Tito_Scwrl_2XT9.pdb
: