Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRAS--RAGKVLDQREAILVTVAGGRITRLSEFYADPAATESFWA
3FGY Chain:A ((2-131))
MSTQENVQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVE-ISYPEPPEFVAQG-ERVLVVGFATGRVKSTNRTFEDDWVFAITVRKSKVTSIREYIDTLALARATN-
General information:
TITO was launched using:
RESULT:
Template:
3FGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61535 for 895 contacts (-68.8/contact) +
2D Compatibility (PS) -13826 + (NN) -3253 + (LL) -104
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -85318.0 ( -95.33 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3FGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FGY-query.scw
PDB file :
Tito_Scwrl_3FGY.pdb
: