Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSY-RNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKL-----------------NPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFT-AGDSYL-AKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR |
| 1RHC Chain:A ((1-226)) | --------MKTQIGYFASLEQY-RPMDALEQAIRAEKVGFDSVWVDDHFHPWYH-DNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWPS-VPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPK-GAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAM---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102362 for 1639 contacts (-62.5/contact) +
2D Compatibility (PS) -22512 + (NN) -12166 + (LL) 2608
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -141282.0 ( -86.20 by residue)
QMean score : 0.457
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