Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRRMQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFFNRTPAEARMRILEGRRRQVEERREGLREAVARASSSFDRYTRQLHQLGLESSEREVKWLNELIAAERAAPNPAEQT
1XMA Chain:A ((42-124))
-VDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEE--T--KRRTYYRITPEGIKYYKQKCEE----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46399 for 526 contacts (-88.2/contact) +
2D Compatibility (PS) -8537 + (NN) -1894 + (LL) 6928
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -57302.0 ( -108.94 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1XMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMA-query.scw
PDB file :
Tito_Scwrl_1XMA.pdb
: