Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQADEIRRARETKSVRDLEHANEIKAAIEALGPIALPVKTSADSGKLFGSVTAADVVAAIKKAGGPNLDKRIVRLPKTHIKAVGTHFVSVHLHPEIDVEVSLDVVAQS
2HBB Chain:A ((1-40))
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEAT----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HBB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32844 for 256 contacts (-128.3/contact) +
2D Compatibility (PS) -4281 + (NN) -1111 + (LL) 8220
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -34166.0 ( -133.46 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_2HBB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HBB-query.scw
PDB file :
Tito_Scwrl_2HBB.pdb
: