Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAA-------RNANPPNAELTSVAN-TPQSYWLDQAFPPATVGGTVARYTGAAQ--AAGAMPVLTLYGIPHRDCGSYASGGFAT-----GTDYR-GWIDAVASGLG---SSPATIIVEPDALAMADC-----LSPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLS--------AEAMAARLNDVGV-GRARGFSLNVSNFYTT--------------DEEIGYGEAISGL----TNGSHYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGR-GEPQAGRFVSQYAIDLAHNAGQ |
| 1DYS Chain:A ((3-344)) | ---------------------------------------------------------------------------------------GNPFSGRTLLVNSDYSSKLDQTRQAFLSRGDQTNAAKVKYVQEKVGTFYWISNIFLLRDIDV-AIQNARAAKARGENPIVGLVLYNLPDRDCSAGESSGELKLSQNGLNRYKNEYVNPFAQKLKAASDVQFAVILEPDAIGNMVTGTSAFCRN-ARGPQQEAIGYAISQLQ-ASHIHLYLDVANGGWLGWADKLEPTAQEVATILQKAGNNAKIRGFSSNVSNYNPYSTSNPPPYTSGSPSPDESRYATNIANAMRQRGLPTQFIIDQSRVALSGARSEWGQWCNVNPAGFGQPFTTNTNNPNVDAIVWVKPGGESDGQCGMGGAPAAGMWFDAYAQMLTQNAHD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84978 for 2465 contacts (-34.5/contact) +
2D Compatibility (PS) -31406 + (NN) -18320 + (LL) 7304
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -148050.0 ( -60.06 by residue)
QMean score : 0.518
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