Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSDTLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFD---RRAILKVFRRV-SSGINPDIELNRVLTRAGNPHVARLLGAYQFGRPNRSPTDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLAD-SLGTA--------Q-----ATFPVDRMLA-RLSSTVAVVPE---LREYAPTIEQQFQKLAAE-AITVQRVHGDLHLGQVLRTPESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTAS |
| 3JR1 Chain:A ((39-285)) | -------------------------------------------------------------------------------------------------------------------------------------KHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----------QGHSFLLLEALNKSKN--------------------------KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVCN-PA---------CYWGDRECDIAFSS-LFE-------------------------PFPTNFYQRYNEIYPLEE-GYLERKLIYQLYYLLNFS------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55979 for 1647 contacts (-34.0/contact) +
2D Compatibility (PS) -22656 + (NN) 4801 + (LL) 14144
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -67890.0 ( -41.22 by residue)
QMean score : 0.285
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