Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQ-------FRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGN-YRERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAM--PPPIFVAASGPQSATLAGRYGDGWIAQAR-DI-NDAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTAGAV---DQ-PNPVEIQRAAESNPIE--KVLANWAVGTDPGVHIGAVQAVLD-AGAVPFLHFPQ-----DDPITAIDFYRTNVLPELR |
| 1LUC Chain:A ((1-352)) | -----------------------------------------MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEF---GLLGNPYVAAAHLLGATETLNVGTAAIVLPT-AHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFR---VFGTDMDNSRALMDCWYDLMKEGFNEGYIAADNEHIKFPKIQLNPSAYTQGGAPVYVVAESASTTEWAAERGLPMILSWIINTHEKKAQLDLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIF-------------RIDYSYEINPVGTPEECIAIIQQDIDATGIDNICCGFEANGSEEEIIASMKLFQSDVMPYLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153730 for 2490 contacts (-61.7/contact) +
2D Compatibility (PS) -32677 + (NN) -21258 + (LL) 1448
1D Compatibility (HY) -8000 + (ID) 2750
Total energy: -216967.0 ( -87.14 by residue)
QMean score : 0.436
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