Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVR-PAANTRSIDDLPLTRFHGDVFDTATVAEAMA--GCDDVYYCVVDTRAW-L-RDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRGHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGR---------TPHGAFIAGAVFGR--LPF--------TMRGIRLEAVGVDDAARALILAAER-G--RNGERYLISER-MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR--PVEESIREAARFWAAMRTVGKDPAAS |
| 4WOK Chain:A ((11-334)) | -ANNVLVVGGAGFIGSHTAKLLAG----QGYAPVVYDNLSTG-HQSA-VRWGDFVEGDILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQNVIFSSSCATYGVPSRLPIGEGEAQ--NPINPYGRTKLIAEHMLADYAVAYGLRYVALRYFNASGADIDGELGEKHDPETHLIPRAMMAAAGRLDVLEVYGDDYETPDGTCIRD-YIHVTDLARAHVLAVEHLKEAGGNLAVNLGTGRGTSIREIVQSIGRLTGRSVPV---AMR--A--------------RRA---G-----DPPALYADPALAAEKLGFHTVYSDLDTIIRTAAPHFGLEV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149330 for 2567 contacts (-58.2/contact) +
2D Compatibility (PS) -31013 + (NN) -4607 + (LL) 2708
1D Compatibility (HY) -5200 + (ID) 3500
Total energy: -190942.0 ( -74.38 by residue)
QMean score : 0.491
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