Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFLQSLCEGGDLDEGFALLSNDFTYWSIVTRTELDKKTFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVSADRTRYDSPFVCIFETR-DGMIISLREYSDTQSLAEVYPVACATPGRC
5AIG Chain:A ((2-124))
------TPIETVTAFIAHWNS-GDMEAMYDLCAEDVVWHNIPMEPIAGKPAMRAAVEGFMANVSQCDWQVHAIAANGATVLTERTDGFTFTNGRRATIRVMGTFECDAERRIIAWRDYFDMLEFQREFAG--------
General information:
TITO was launched using:
RESULT:
Template:
5AIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61537 for 853 contacts (-72.1/contact) +
2D Compatibility (PS) -13375 + (NN) -6433 + (LL) 168
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -85977.0 ( -100.79 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_5AIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AIG-query.scw
PDB file :
Tito_Scwrl_5AIG.pdb
: