Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTHDDTWDIKTSVGATAVMVAAARAVETDRPDPLIRDPYARLLVTNAGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFASAVAAGIRQVVILASGLDSRAYRLDWPAGTIVYEIDQ-PKVLSYKSTTLAENGVTPSAGRREVPADLRQDWPAALRDAGFDPTARTAWLAEGLLMYLPAEAQDRLFTQVGAVSVAGSRIAAETAPVHGEERRAEMRARFKKVADVLGIEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDEMRRVGRWVEGVPMADDPTAFAEFVTAERL |
| 4IV0 Chain:A ((71-220)) | ----------------------------------------------------------------------------------------------------DANSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVTIAKLRNQDK-----AKIEFEAKDILKK---DF-----PESTFDMIYSRDSILHLSYADKKMLFEKCYKWLKPNGILLITDYCADKIENW------DEEFKA-Y-I---KKRK-YTLMPI--QEYGDLIKSCKFQNVEA---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -48320 for 1089 contacts (-44.4/contact) +
2D Compatibility (PS) -15437 + (NN) -187 + (LL) 12580
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -58164.0 ( -53.41 by residue)
QMean score : 0.342
|
|
|